If you do get them buffed out and want to protect in the future might be worth buying some clear film, kind of like a screen protector on a smartphone. Totally invisible and can be replaced as needed.
These little scratches on the wood trim is exactly why I went with the bushed al. I've had the faux wood on all our previous rides and it always gets scratched up. Hoping the aluminum is a bit more durable.
http://www.clearmask.com/vehicle_pag...FILMS&year=all
I just ordered the front end protection kit plus a strip of the 4" x 10' bulk.